Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LFA_2579 | murJ | LFA_2579 | LFA_2581 | Homologs of previously reported genes of unknown function. | Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.584 |
| LFA_2579 | pepA-2 | LFA_2579 | LFA_2580 | Homologs of previously reported genes of unknown function. | Leucine aminopeptidase; Belongs to the peptidase M17 family. | 0.584 |
| LFA_2579 | rlpB | LFA_2579 | LFA_1273 | Homologs of previously reported genes of unknown function. | Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.423 |
| LFA_2579 | rpsT | LFA_2579 | LFA_2582 | Homologs of previously reported genes of unknown function. | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | 0.454 |
| murJ | LFA_2579 | LFA_2581 | LFA_2579 | Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Homologs of previously reported genes of unknown function. | 0.584 |
| murJ | pepA-2 | LFA_2581 | LFA_2580 | Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | Leucine aminopeptidase; Belongs to the peptidase M17 family. | 0.809 |
| murJ | rpsT | LFA_2581 | LFA_2582 | Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | 0.631 |
| pepA-2 | LFA_2579 | LFA_2580 | LFA_2579 | Leucine aminopeptidase; Belongs to the peptidase M17 family. | Homologs of previously reported genes of unknown function. | 0.584 |
| pepA-2 | murJ | LFA_2580 | LFA_2581 | Leucine aminopeptidase; Belongs to the peptidase M17 family. | Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.809 |
| pepA-2 | rpsT | LFA_2580 | LFA_2582 | Leucine aminopeptidase; Belongs to the peptidase M17 family. | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | 0.603 |
| rlpB | LFA_2579 | LFA_1273 | LFA_2579 | Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | Homologs of previously reported genes of unknown function. | 0.423 |
| rpsT | LFA_2579 | LFA_2582 | LFA_2579 | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | Homologs of previously reported genes of unknown function. | 0.454 |
| rpsT | murJ | LFA_2582 | LFA_2581 | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.631 |
| rpsT | pepA-2 | LFA_2582 | LFA_2580 | 30S ribosomal subunit protein S20; Binds directly to 16S ribosomal RNA. | Leucine aminopeptidase; Belongs to the peptidase M17 family. | 0.603 |