STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFA_2606Homologs of previously reported genes of unknown function. (302 aa)    
Predicted Functional Partners:
LFA_3173
DNA uptake/competence protein ComA; Function of strongly homologous gene; membrane component.
  
  
 0.724
LFA_2605
Protein of unknown function; No homology to any previously reported sequences.
       0.718
LFA_3299
Homologs of previously reported genes of unknown function.
   
   0.675
LFA_2599
Polyketide synthase family protein (fragment).
  
  
 0.561
LFA_0888
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase; Function of strongly homologous gene; enzyme.
  
  
 0.534
LFA_1667
Homologs of previously reported genes of unknown function.
   
    0.520
LFA_2966
Signal peptidase.
   
    0.520
LFA_2218
Serine metalloprotease; Belongs to the peptidase S8 family.
  
  
 0.516
recA
DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
   
  
 0.503
LFA_3266
Putative Glutamate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.502
Your Current Organism:
Legionella fallonii
NCBI taxonomy Id: 1212491
Other names: L. fallonii LLAP-10, Legionella fallonii ATCC 700992, Legionella fallonii LLAP-10, Legionella fallonii str. LLAP-10, Legionella fallonii strain LLAP-10
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.