STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFO52304.1COG0392 Predicted integral membrane protein. (443 aa)    
Predicted Functional Partners:
AFO52299.1
COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A).
       0.588
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
       0.578
rpmI
COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
       0.573
AFO52298.1
Hypothetical protein; COG0178 Excinuclease ATPase subunit.
       0.558
AFO52300.1
COG4508 Uncharacterized protein conserved in bacteria.
       0.558
AFO52301.1
Hypothetical protein.
       0.539
AFO52040.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COG0558 Phosphatidylglycerophosphate synthase.
  
  
 0.494
AFO51593.1
Cardiolipin synthase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
  
  
 0.487
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
     
 0.446
Your Current Organism:
Mycoplasma haemolamae
NCBI taxonomy Id: 1212765
Other names: C. Mycoplasma haemolamae str. Purdue, Candidatus Mycoplasma haemolamae str. Purdue, Candidatus Mycoplasma haemolamae strain Purdue
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