STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0012Putative exported protein. (132 aa)    
Predicted Functional Partners:
APY04_0013
Hypothetical protein.
       0.601
APY04_0014
RND efflux system, inner membrane transporter CmeB.
       0.601
APY04_0015
Membrane fusion protein of RND family multidrug efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.601
APY04_1719
Hypothetical protein.
  
  
  0.530
APY04_2755
Transcriptional regulator, MarR family.
  
    0.520
APY04_3107
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  0.487
APY04_0016
Putative transcriptional regulator of NADH dehydrogenase, Rrf2 family.
  
    0.462
APY04_0635
Aminoglycoside 6'-N-acetyltransferase.
  
  
  0.461
APY04_0482
Streptomycin 3''-kinase.
  
     0.451
APY04_1680
Putative transmembrane protein.
  
 
  0.444
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.