STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0064Sensory transduction histidine kinase. (305 aa)    
Predicted Functional Partners:
APY04_1489
Two-component hybrid sensor and regulator.
  
 0.980
APY04_2698
Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
   
  0.949
APY04_3015
DNA-directed RNA polymerase specialized sigma subunit; Sigma24-like.
 
  
 0.899
APY04_3011
Two-component hybrid sensor and regulator.
  
 0.895
APY04_1938
Hypothetical protein.
    
 0.873
APY04_2694
Methyl-accepting chemotaxis protein.
    
 0.832
APY04_3255
Multi-sensor hybrid histidine kinase.
    
 0.819
APY04_3016
RNA polymerase sigma-70 factor, ECF subfamily.
 
   
 0.751
APY04_1784
Sensory histidine kinase AtoS.
     
 0.631
APY04_0366
Hypothetical protein.
    
 0.626
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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