STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0468Sulfur oxidation molybdopterin C protein. (449 aa)    
Predicted Functional Partners:
APY04_0467
Sulfite dehydrogenase cytochrome subunit SoxD.
 
 
 0.990
APY04_0370
Sulfur oxidation protein SoxZ.
 
  
 0.962
APY04_0371
Sulfur oxidation protein SoxY.
 
  
 0.959
APY04_0130
Thiosulfate sulfurtransferase, rhodanese.
    
 0.882
cysD
Sulfate adenylyltransferase subunit 2.
     
 0.876
APY04_0967
Hypothetical protein.
 
  
 0.810
APY04_0372
Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor.
 
  
 0.792
cysC
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate.
     
 0.773
APY04_1505
Hypothetical protein.
    
 0.761
APY04_0466
3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II.
       0.709
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.