STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0576Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone. (199 aa)    
Predicted Functional Partners:
APY04_1952
Thiol:disulfide oxidoreductase TlpA.
 
 
 0.961
APY04_2343
Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.929
APY04_0750
Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase.
  
 
 0.912
APY04_3265
Cytochrome c oxidase polypeptide II.
  
 
 0.910
ctaG
Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
 
 0.880
APY04_1580
Cytochrome c2.
 
  
 0.845
APY04_1071
Membrane c-type cytochrome cy.
 
  
 0.837
APY04_0894
Zinc ABC transporter, periplasmic-binding protein ZnuA.
 
      0.829
APY04_2863
Conserved membrane protein in copper uptake, YcnI.
 
   
 0.821
APY04_1308
Cytochrome c552.
    
 0.718
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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