STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0659Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (321 aa)    
Predicted Functional Partners:
APY04_2550
Thymidylate kinase.
   
 0.972
APY04_1451
Beta N-acetyl-glucosaminidase.
    
 0.729
APY04_0658
Putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Belongs to the glycosyltransferase 26 family.
     
 0.640
APY04_0614
Hypothetical protein.
    
 0.618
APY04_3481
Hypothetical protein.
  
 
 0.615
APY04_0660
Xanthan biosynthesis exopolysaccharide polymerase GumE.
     
 0.602
APY04_1270
Oxalate decarboxylase.
 
     0.594
APY04_0669
Glucoamylase.
  
 
 0.561
APY04_0822
Putative phage protein; YPO2110.
    
 0.545
APY04_0211
Hypothetical protein.
    
  0.543
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.