STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0667Glucose-1-phosphate thymidylyltransferase. (296 aa)    
Predicted Functional Partners:
APY04_3524
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
 0.999
APY04_1214
UDP-glucose dehydrogenase.
  
 
 0.986
APY04_1270
Oxalate decarboxylase.
  
 
 0.985
APY04_0877
UTP--glucose-1-phosphate uridylyltransferase.
 
0.953
APY04_2208
Phosphomannomutase.
  
 
 0.931
APY04_0665
UDP-glucose 4-epimerase.
  
 
 0.834
APY04_0925
Hypothetical protein.
  
 
 0.820
APY04_2907
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.820
APY04_3107
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.813
APY04_0661
Polysaccharide biosynthesis protein.
  
  
 0.790
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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