STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_06824-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (398 aa)    
Predicted Functional Partners:
APY04_0991
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
 
 
 0.984
APY04_0684
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
 
 0.951
APY04_0683
4-amino-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) acetyltrasferase.
  0.939
APY04_2886
Nucleoside-diphosphate sugar epimerase/dehydratase.
 
 0.922
APY04_0096
Undecaprenyl-phosphate galactosephosphotransferase.
 
 0.913
APY04_1550
Lipid carrier : UDP-N-acetylgalactosaminyltransferase.
 
 0.911
APY04_1520
Putative glycosyl transferase.
 
 
 0.894
APY04_1270
Oxalate decarboxylase.
  
 
 0.611
APY04_3107
Mannose-1-phosphate guanylyltransferase (GDP); Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.561
APY04_0989
Oxidoreductase.
  
 
 0.550
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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