STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0716Chaperone-modulator protein CbpM. (103 aa)    
Predicted Functional Partners:
APY04_0715
DnaJ-class molecular chaperone CbpA.
 
 
 0.994
APY04_1291
DnaJ-class molecular chaperone CbpA.
  
 
 0.939
APY04_2810
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
    
 0.805
APY04_2895
Adenylate cyclase.
    
 0.789
APY04_2032
NADP-dependent malic enzyme.
    
  0.763
APY04_0527
Glutamate synthase [NADPH] large chain.
    
  0.760
APY04_0114
Hypothetical protein.
    
 0.700
rpoB
DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.653
APY04_0492
Methylmalonyl-CoA mutase.
     
 0.625
APY04_1140
Methylmalonyl-CoA mutase.
     
 0.625
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.