STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_0891Gamma-glutamyltranspeptidase. (579 aa)    
Predicted Functional Partners:
APY04_0527
Glutamate synthase [NADPH] large chain.
     
 0.942
APY04_2285
Glutathione reductase; Maintains high levels of reduced glutathione.
     
 0.875
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
 0.871
pepA
Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
     
 0.864
APY04_3489
Peptidase B; Belongs to the peptidase M17 family.
     
 0.864
APY04_1785
Membrane alanine aminopeptidase N.
     
 0.855
APY04_0864
Glutathione S-transferase family protein.
     
 0.844
APY04_3490
Glutathione S-transferase.
     
 0.844
APY04_1245
5-oxoprolinase.
    
 0.834
APY04_0890
Glycine oxidase ThiO.
  
 
 0.820
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.