STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_1038ABC-type multidrug transport system, ATPase and permease component. (549 aa)    
Predicted Functional Partners:
cysA
Sulfate and thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
 
0.964
APY04_1672
Sulfonate ABC transporter, ATP-binding subunit SsuB.
 
    
0.914
hmuV
ABC-type hemin transport system, ATPase component; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.
 
   
0.910
APY04_0367
Lipid A export ATP-binding/permease protein MsbA.
  
 
0.880
APY04_1639
ABC transporter ATP-binding protein.
 
    
0.830
APY04_1560
ABC transporter, ATP-binding protein.
  
0.764
APY04_3469
ABC-type multidrug transport system, ATPase component.
   
0.747
APY04_3190
Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
 0.649
APY04_0021
Permeases of the major facilitator superfamily.
   
  0.582
APY04_1145
ThiJ/PfpI family protein.
   
  0.582
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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