STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_1042Hypothetical protein. (182 aa)    
Predicted Functional Partners:
APY04_3183
Hypothetical protein.
  
     0.768
APY04_3499
Type IV prepilin peptidase TadV/CpaA.
  
     0.765
APY04_3491
Flp pilus assembly protein TadD, contains TPR repeat.
  
     0.764
APY04_3502
Hypothetical protein; Similar to secretin RcpA/CpaC, associated with Flp pilus assembly.
  
     0.764
APY04_2251
Hypothetical protein.
  
     0.756
APY04_3504
Superfamily 1 helicase.
  
     0.744
APY04_1411
Hypothetical protein.
  
     0.741
APY04_2133
Putative TRANSMEMBRANE PROTEIN.
  
     0.740
APY04_0539
Putative integral membrane protein.
  
     0.739
APY04_3495
Type II/IV secretion system ATPase TadZ/CpaE, associated with Flp pilus assembly.
  
     0.739
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.