Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APY04_1352 | APY04_1354 | APY04_1352 | APY04_1354 | SAM-dependent methyltransferase 2, in cluster with Hydroxyacylglutathione hydrolase. | Hypothetical protein. | 0.577 |
APY04_1352 | gloB | APY04_1352 | APY04_1353 | SAM-dependent methyltransferase 2, in cluster with Hydroxyacylglutathione hydrolase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.629 |
APY04_1354 | APY04_1352 | APY04_1354 | APY04_1352 | Hypothetical protein. | SAM-dependent methyltransferase 2, in cluster with Hydroxyacylglutathione hydrolase. | 0.577 |
APY04_1354 | APY04_1355 | APY04_1354 | APY04_1355 | Hypothetical protein. | Hypothetical protein. | 0.427 |
APY04_1354 | gloB | APY04_1354 | APY04_1353 | Hypothetical protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.926 |
APY04_1355 | APY04_1354 | APY04_1355 | APY04_1354 | Hypothetical protein. | Hypothetical protein. | 0.427 |
APY04_1355 | gloB | APY04_1355 | APY04_1353 | Hypothetical protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.427 |
APY04_1558 | APY04_2982 | APY04_1558 | APY04_2982 | Rhodanese-related sulfurtransferase. | Hypothetical protein. | 0.863 |
APY04_1558 | APY04_3034 | APY04_1558 | APY04_3034 | Rhodanese-related sulfurtransferase. | Metallo-beta-lactamase family protein. | 0.453 |
APY04_1558 | APY04_3521 | APY04_1558 | APY04_3521 | Rhodanese-related sulfurtransferase. | Putative metal-binding YcbL-like protein. | 0.453 |
APY04_1558 | gloB | APY04_1558 | APY04_1353 | Rhodanese-related sulfurtransferase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.453 |
APY04_2483 | APY04_3521 | APY04_2483 | APY04_3521 | Lactoylglutathione lyase. | Putative metal-binding YcbL-like protein. | 0.922 |
APY04_2483 | gloB | APY04_2483 | APY04_1353 | Lactoylglutathione lyase. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.974 |
APY04_2982 | APY04_1558 | APY04_2982 | APY04_1558 | Hypothetical protein. | Rhodanese-related sulfurtransferase. | 0.863 |
APY04_2982 | APY04_3034 | APY04_2982 | APY04_3034 | Hypothetical protein. | Metallo-beta-lactamase family protein. | 0.767 |
APY04_2982 | APY04_3521 | APY04_2982 | APY04_3521 | Hypothetical protein. | Putative metal-binding YcbL-like protein. | 0.767 |
APY04_2982 | gloB | APY04_2982 | APY04_1353 | Hypothetical protein. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.767 |
APY04_3034 | APY04_1558 | APY04_3034 | APY04_1558 | Metallo-beta-lactamase family protein. | Rhodanese-related sulfurtransferase. | 0.453 |
APY04_3034 | APY04_2982 | APY04_3034 | APY04_2982 | Metallo-beta-lactamase family protein. | Hypothetical protein. | 0.767 |
APY04_3034 | APY04_3521 | APY04_3034 | APY04_3521 | Metallo-beta-lactamase family protein. | Putative metal-binding YcbL-like protein. | 0.758 |
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