STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_1487Hypothetical protein. (673 aa)    
Predicted Functional Partners:
APY04_2895
Adenylate cyclase.
  
  
  0.814
APY04_3243
Paraquat-inducible protein A.
  
     0.607
APY04_1311
Hypothetical protein.
  
     0.597
APY04_1967
Conserved hypothetical protein-putative ATP-binding protein.
  
     0.583
APY04_1050
N-acetylmuramoyl-L-alanine amidase.
  
     0.573
APY04_0869
Hypothetical protein.
 
     0.522
APY04_0952
Fatty acid desaturase family protein.
  
     0.522
APY04_2810
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
     
 0.518
APY04_2671
Hypothetical protein.
  
     0.511
APY04_1049
N-acetylmuramoyl-L-alanine amidase.
  
     0.510
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.