STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuDAlkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (395 aa)    
Predicted Functional Partners:
APY04_1673
Alkanesulfonates transport system permease protein.
 
  0.969
APY04_1676
FMN reductase.
 
  0.903
APY04_1668
Hypothetical protein.
 
  
  0.900
APY04_1674
ABC-type transport system periplasmic component.
 
  0.889
APY04_0476
FMN reductase.
 
  0.866
APY04_0475
Methylene tetrahydromethanopterin reductase; Sulfonate monooxygenase.
  
  
 
0.798
APY04_1678
Acyl-CoA dehydrogenase; Probable dibenzothiophene desulfurization enzyme.
  
    0.747
APY04_1593
Phosphoadenylyl-sulfate reductase [thioredoxin]; Reduction of activated sulfate into sulfite.
   
 
  0.746
APY04_3483
Acyl-CoA dehydrogenase; Probable dibenzothiophene desulfurization enzyme.
  
    0.719
APY04_3482
Methylene tetrahydromethanopterin reductase; Coenzyme F420-dependent.
  
  
  0.717
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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