Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
APY04_1882 | APY04_1883 | Hypothetical protein. | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | 0.773 |
APY04_1882 | APY04_1884 | Hypothetical protein. | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | 0.773 |
APY04_1882 | APY04_1885 | Hypothetical protein. | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation. | 0.773 |
APY04_1882 | APY04_1886 | Hypothetical protein. | Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.773 |
APY04_1882 | APY04_1888 | Hypothetical protein. | Cytochrome c oxidase subunit CcoO. | 0.773 |
APY04_1882 | APY04_1889 | Hypothetical protein. | Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family. | 0.773 |
APY04_1883 | APY04_1882 | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | Hypothetical protein. | 0.773 |
APY04_1883 | APY04_1884 | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | 0.870 |
APY04_1883 | APY04_1885 | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation. | 0.824 |
APY04_1883 | APY04_1886 | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.859 |
APY04_1883 | APY04_1888 | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | Cytochrome c oxidase subunit CcoO. | 0.866 |
APY04_1883 | APY04_1889 | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family. | 0.846 |
APY04_1884 | APY04_1882 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Hypothetical protein. | 0.773 |
APY04_1884 | APY04_1883 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Type cbb3 cytochrome oxidase biogenesis protein CcoS, involved in heme b insertion. | 0.870 |
APY04_1884 | APY04_1885 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation. | 0.931 |
APY04_1884 | APY04_1886 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.985 |
APY04_1884 | APY04_1888 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Cytochrome c oxidase subunit CcoO. | 0.928 |
APY04_1884 | APY04_1889 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family. | 0.955 |
APY04_1884 | APY04_3000 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family. | 0.825 |
APY04_1884 | APY04_3003 | Type cbb3 cytochrome oxidase biogenesis protein CcoH. | Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.951 |
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