STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_1891Transcriptional regulatory protein. (214 aa)    
Predicted Functional Partners:
APY04_2895
Adenylate cyclase.
  
 0.887
APY04_0527
Glutamate synthase [NADPH] large chain.
    
 0.836
APY04_2725
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
  
  
 0.692
APY04_2896
cAMP-binding protein; Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
  
  
 0.668
APY04_0958
Proline dehydrogenase (Proline oxidase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.667
APY04_1489
Two-component hybrid sensor and regulator.
   
 0.619
APY04_2032
NADP-dependent malic enzyme.
   
 
 0.578
APY04_0951
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.553
APY04_1391
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.553
APY04_1397
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex.
   
 
 0.520
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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