STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_1910Integral membrane protein CcmA involved in cell shape determination. (171 aa)    
Predicted Functional Partners:
APY04_1161
Integral membrane protein CcmA involved in cell shape determination.
  
     0.774
APY04_1816
Integral membrane protein CcmA involved in cell shape determination.
  
     0.774
APY04_1301
Hypothetical protein.
  
     0.678
APY04_3175
Putative hydrolase of HD superfamily; COG1896.
  
     0.672
APY04_3137
Hypothetical protein.
  
     0.569
APY04_2413
Hypothetical protein.
  
     0.552
APY04_1909
Hypothetical protein.
   
   0.483
APY04_0686
Sensor histidine kinase in cluster with mercury reductase.
  
     0.477
APY04_1566
Dihydroneopterin aldolase; Delta 1-pyrroline-5-carboxylate synthetase.
  
     0.474
APY04_2184
Hypothetical protein.
  
     0.450
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.