node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APY04_0456 | infB | APY04_0456 | APY04_2058 | ATP-dependent RNA helicase RhlE. | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.400 |
APY04_0456 | pnp | APY04_0456 | APY04_2063 | ATP-dependent RNA helicase RhlE. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.940 |
APY04_0456 | rne | APY04_0456 | APY04_1186 | ATP-dependent RNA helicase RhlE. | Cytoplasmic axial filament protein CafA and Ribonuclease G; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.795 |
APY04_0456 | rpoB | APY04_0456 | APY04_0235 | ATP-dependent RNA helicase RhlE. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.817 |
APY04_0456 | truB | APY04_0456 | APY04_2061 | ATP-dependent RNA helicase RhlE. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.452 |
APY04_0950 | infB | APY04_0950 | APY04_2058 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.400 |
APY04_0950 | pnp | APY04_0950 | APY04_2063 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.940 |
APY04_0950 | rne | APY04_0950 | APY04_1186 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Cytoplasmic axial filament protein CafA and Ribonuclease G; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.795 |
APY04_0950 | rpoB | APY04_0950 | APY04_0235 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.817 |
APY04_0950 | truB | APY04_0950 | APY04_2061 | ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.452 |
APY04_1004 | APY04_2945 | APY04_1004 | APY04_2945 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | ATP-dependent RNA helicase. | 0.424 |
APY04_1004 | pnp | APY04_1004 | APY04_2063 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.932 |
APY04_1004 | rho | APY04_1004 | APY04_2568 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.431 |
APY04_1004 | rne | APY04_1004 | APY04_1186 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Cytoplasmic axial filament protein CafA and Ribonuclease G; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.527 |
APY04_2945 | APY04_1004 | APY04_2945 | APY04_1004 | ATP-dependent RNA helicase. | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.424 |
APY04_2945 | infB | APY04_2945 | APY04_2058 | ATP-dependent RNA helicase. | Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.400 |
APY04_2945 | pnp | APY04_2945 | APY04_2063 | ATP-dependent RNA helicase. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.947 |
APY04_2945 | rne | APY04_2945 | APY04_1186 | ATP-dependent RNA helicase. | Cytoplasmic axial filament protein CafA and Ribonuclease G; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.795 |
APY04_2945 | rpoB | APY04_2945 | APY04_0235 | ATP-dependent RNA helicase. | DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.817 |
APY04_2945 | truB | APY04_2945 | APY04_2061 | ATP-dependent RNA helicase. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.452 |