Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APY04_0420 | APY04_0952 | APY04_0420 | APY04_0952 | Phytoene/squalene synthetase-like protein. | Fatty acid desaturase family protein. | 0.461 |
APY04_0420 | APY04_1306 | APY04_0420 | APY04_1306 | Phytoene/squalene synthetase-like protein. | Cytochrome P450. | 0.736 |
APY04_0420 | APY04_1333 | APY04_0420 | APY04_1333 | Phytoene/squalene synthetase-like protein. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.781 |
APY04_0420 | APY04_2551 | APY04_0420 | APY04_2551 | Phytoene/squalene synthetase-like protein. | Hypothetical protein. | 0.962 |
APY04_0420 | APY04_3396 | APY04_0420 | APY04_3396 | Phytoene/squalene synthetase-like protein. | Hypothetical protein. | 0.860 |
APY04_0420 | idi | APY04_0420 | APY04_2954 | Phytoene/squalene synthetase-like protein. | Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). | 0.758 |
APY04_0516 | APY04_1257 | APY04_0516 | APY04_1257 | Monooxygenase, FAD-binding. | Monooxygenase, FAD-binding. | 0.725 |
APY04_0516 | APY04_1306 | APY04_0516 | APY04_1306 | Monooxygenase, FAD-binding. | Cytochrome P450. | 0.491 |
APY04_0516 | APY04_1333 | APY04_0516 | APY04_1333 | Monooxygenase, FAD-binding. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.495 |
APY04_0516 | APY04_2174 | APY04_0516 | APY04_2174 | Monooxygenase, FAD-binding. | Carboxylesterase, type B. | 0.516 |
APY04_0516 | APY04_2551 | APY04_0516 | APY04_2551 | Monooxygenase, FAD-binding. | Hypothetical protein. | 0.531 |
APY04_0952 | APY04_0420 | APY04_0952 | APY04_0420 | Fatty acid desaturase family protein. | Phytoene/squalene synthetase-like protein. | 0.461 |
APY04_0952 | APY04_1306 | APY04_0952 | APY04_1306 | Fatty acid desaturase family protein. | Cytochrome P450. | 0.845 |
APY04_0952 | APY04_1333 | APY04_0952 | APY04_1333 | Fatty acid desaturase family protein. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.698 |
APY04_0952 | APY04_2551 | APY04_0952 | APY04_2551 | Fatty acid desaturase family protein. | Hypothetical protein. | 0.761 |
APY04_1257 | APY04_0516 | APY04_1257 | APY04_0516 | Monooxygenase, FAD-binding. | Monooxygenase, FAD-binding. | 0.725 |
APY04_1257 | APY04_1306 | APY04_1257 | APY04_1306 | Monooxygenase, FAD-binding. | Cytochrome P450. | 0.589 |
APY04_1257 | APY04_1333 | APY04_1257 | APY04_1333 | Monooxygenase, FAD-binding. | Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. | 0.495 |
APY04_1257 | APY04_2551 | APY04_1257 | APY04_2551 | Monooxygenase, FAD-binding. | Hypothetical protein. | 0.531 |
APY04_1267 | APY04_1306 | APY04_1267 | APY04_1306 | Membrane-associated phospholipid phosphatase. | Cytochrome P450. | 0.940 |
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