STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_2658Iron siderophore receptor protein. (151 aa)    
Predicted Functional Partners:
APY04_2659
Iron siderophore receptor protein.
  
 
  0.796
APY04_2660
Hypothetical protein.
       0.773
APY04_2661
Iron siderophore receptor protein.
      
0.473
APY04_1287
Hypothetical protein.
   
   0.429
APY04_2237
Ferric siderophore transport system, periplasmic binding protein TonB.
   
   0.429
APY04_2652
Ferric siderophore transport system, periplasmic binding protein TonB.
   
   0.429
APY04_2653
Ferric siderophore transport system, periplasmic binding protein TonB.
   
   0.429
APY04_3252
Hypothetical protein.
   
   0.429
APY04_3439
Extensin-like protein.
   
   0.429
APY04_2657
Hypothetical protein.
       0.410
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.