STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_2728Glutamine amidotransferase protein GlxB. (298 aa)    
Predicted Functional Partners:
APY04_2729
Glutamate synthase [NADPH] putative GlxC chain.
 
  0.999
APY04_2730
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
 
 0.998
APY04_0083
Histamine dehydrogenase.
  
 0.994
APY04_0527
Glutamate synthase [NADPH] large chain.
  
 0.992
APY04_0019
Ferredoxin--NADP(+) reductase, actinobacterial (eukaryote-like) type.
  
 0.953
APY04_0526
Glutamate synthase [NADPH] small chain.
  
 0.953
APY04_2731
Glutamine synthetase type I.
 
 
 0.930
APY04_2725
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
 
  
 0.925
APY04_2727
Sarcosine oxidase beta subunit.
 
  
  0.889
APY04_2723
Transcriptional regulator, MerR family.
 
     0.885
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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