STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_2743Hypothetical protein. (230 aa)    
Predicted Functional Partners:
APY04_2742
Putative MupW.
  
    0.776
APY04_2989
Hypothetical protein; TPR repeat, SEL1 subfamily.
 
    
0.771
APY04_2744
Hypothetical protein.
       0.746
APY04_0958
Proline dehydrogenase (Proline oxidase); Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
  0.639
APY04_2741
Large subunit of N,N-dimethylformamidase.
       0.543
APY04_3255
Multi-sensor hybrid histidine kinase.
    
 0.459
APY04_2745
Hypothetical protein.
       0.452
APY04_1938
Hypothetical protein.
    
 0.448
APY04_3011
Two-component hybrid sensor and regulator.
    
 0.448
APY04_1489
Two-component hybrid sensor and regulator.
    
  0.438
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.