STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_2893Hypothetical protein; Belongs to the UPF0262 family. (165 aa)    
Predicted Functional Partners:
APY04_2894
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     0.987
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.826
APY04_2266
Hypothetical protein.
  
     0.702
APY04_2891
Hypothetical protein.
       0.695
APY04_3393
Proteophosphoglycan precursor non-functional.
  
     0.583
APY04_0759
Hypothetical protein.
  
     0.575
APY04_0981
Protein of unknown function DUF983.
 
     0.565
APY04_1957
Methyl-accepting chemotaxis protein.
  
     0.542
APY04_2057
Putative transcription terminating protein; COG2740; ribosomal protein L7Ae family protein.
  
     0.531
APY04_1921
Protein of unknown function DUF465.
  
     0.522
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.