STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_2918Zinc uptake regulation protein ZUR; Belongs to the Fur family. (136 aa)    
Predicted Functional Partners:
APY04_0527
Glutamate synthase [NADPH] large chain.
    
 0.864
APY04_2637
Zinc uptake regulation protein ZUR; Belongs to the Fur family.
  
  
 
0.765
APY04_3466
Zinc uptake regulation protein ZUR; Belongs to the Fur family.
  
  
 
0.704
znuC
Zinc ABC transporter, ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
  
 0.654
APY04_2920
Hypothetical protein.
 
     0.608
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.561
APY04_2919
Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family.
     
 0.545
APY04_2917
Hypothetical protein.
       0.523
APY04_0894
Zinc ABC transporter, periplasmic-binding protein ZnuA.
 
  
 0.429
folE-3
GTP cyclohydrolase I type 1.
       0.411
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.