STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_2956Cytochrome c-L precursor (Cytochrome c551I) (Cytochrome c552). (150 aa)    
Predicted Functional Partners:
APY04_1012
Ubiquinol--cytochrome c reductase, cytochrome B subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.940
APY04_2968
MxaJ, protein involved in methanol oxidation.
  
  
  0.929
APY04_2970
Methanol dehydrogenase, small subunit; Catalyzes the oxidation of primary alcohols including methanol.
  
  
  0.929
APY04_2973
MxaA protein.
  
  
  0.929
APY04_2974
MxaC, protein involved in Ca2+ insertion into methanol dehydrogenase.
  
  
  0.929
APY04_2976
MxaL protein.
  
  
  0.929
APY04_2348
Cytochrome c oxidase polypeptide III.
   
 0.923
APY04_2967
Methanol dehydrogenase large subunit protein.
  
 
  0.920
APY04_2977
MxaD protein.
  
  
  0.920
APY04_0467
Sulfite dehydrogenase cytochrome subunit SoxD.
    
 0.877
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.