STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_2983Zn-dependent hydrolase. (296 aa)    
Predicted Functional Partners:
APY04_2982
Hypothetical protein.
  
  0.969
APY04_2985
Putative transmembrane protein.
 
     0.848
APY04_2984
Gene II and X protein.
 
     0.841
APY04_0372
Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor.
    
  0.748
APY04_2981
Putative permease.
       0.677
APY04_2986
Hypothetical protein.
       0.675
APY04_3521
Putative metal-binding YcbL-like protein.
  
  
 
0.557
APY04_0130
Thiosulfate sulfurtransferase, rhodanese.
   
 
 0.538
APY04_0742
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.529
APY04_0468
Sulfur oxidation molybdopterin C protein.
   
 
  0.528
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.