STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_3003Cytochrome c oxidase subunit CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (290 aa)    
Predicted Functional Partners:
APY04_3000
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
APY04_3001
Cytochrome c oxidase subunit CcoO.
 
 0.999
APY04_1889
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
 0.996
APY04_1888
Cytochrome c oxidase subunit CcoO.
 
 0.992
APY04_2348
Cytochrome c oxidase polypeptide III.
   
 0.984
APY04_3002
Hypothetical protein.
  
 0.982
APY04_3004
Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation.
  
 0.977
APY04_3005
Type cbb3 cytochrome oxidase biogenesis protein CcoH.
 
 
 0.969
APY04_1884
Type cbb3 cytochrome oxidase biogenesis protein CcoH.
 
 
 0.951
APY04_1012
Ubiquinol--cytochrome c reductase, cytochrome B subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.942
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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