STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_3041Two-component hybrid sensor and regulator. (463 aa)    
Predicted Functional Partners:
APY04_2619
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.986
APY04_3042
Two-component response regulator.
  0.965
APY04_1926
Two-component system response regulator QseB.
  0.865
APY04_3147
Two component response regulator.
  0.839
APY04_0565
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
  0.838
APY04_1874
DNA-binding response regulator.
 
  0.832
APY04_2392
Two-component system response regulator QseB.
 
  0.827
APY04_1778
Response regulator in two-component regulatory system with PhoQ.
  0.820
APY04_2229
Two-component system response regulator QseB.
 
  0.820
APY04_2895
Adenylate cyclase.
   
 0.820
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.