STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APY04_3083MFS permease. (563 aa)    
Predicted Functional Partners:
APY04_2327
Para-aminobenzoate synthase, aminase component; Aminodeoxychorismate lyase.
   
 
 0.556
APY04_0559
Putative formate dehydrogenase oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
  0.546
APY04_1153
NAD-dependent formate dehydrogenase alpha subunit.
  
  0.509
APY04_3084
Hypothetical protein.
       0.433
APY04_3082
Hypothetical protein.
       0.425
APY04_1155
NAD-dependent formate dehydrogenase delta subunit.
 
     0.406
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase.
 
    0.400
Your Current Organism:
Hyphomicrobium sulfonivorans
NCBI taxonomy Id: 121290
Other names: ATCC BAA-113, DSM 13863, H. sulfonivorans, Hyphomicrobium sp. S1, Hyphomicrobium sulfonivorans Borodina et al. 2002, strain S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.