STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV43550.1ZIP family zinc transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)    
Predicted Functional Partners:
ALV43551.1
Translation factor Sua5; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.
       0.542
ALV40730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.516
ALV41125.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.506
ALV41127.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.494
ALV42266.1
Cytochrome C biogenesis protein ResC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.480
ALV42896.1
DtxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.476
ALV42477.1
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.469
ALV43517.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.449
ALV40151.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.425
Your Current Organism:
Pseudarthrobacter sulfonivorans
NCBI taxonomy Id: 121292
Other names: ATCC BAA-112, Arthrobacter sp. ALL, Arthrobacter sulfonivorans, Arthrobacter sulfonivorans Borodina et al. 2002, DSM 14002, JCM 13520, P. sulfonivorans, Pseudarthrobacter sulfonivorans (Borodina et al. 2002) Busse 2016, strain ALL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.