STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chyC-0Short-chain dehydrogenase chyC. (263 aa)    
Predicted Functional Partners:
OLE1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.598
curS2
Non-reducing polyketide synthase curS2.
   
  0.553
Cob_10225
2fe-2s iron-sulfur cluster binding domain protein.
   
  0.533
ymaE
Metallo-beta-lactamase family protein.
   
  0.533
Cob_v002937
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
  0.519
DYR
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
   
 
  0.504
ovca2
Dihydrofolate reductase.
   
 
  0.504
fabD
Malonyl CoA-acyl carrier protein transacylase.
   
  0.435
Cob_00067
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
  0.427
Cob_03749
Short-chain dehydrogenase reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.411
Your Current Organism:
Colletotrichum orbiculare
NCBI taxonomy Id: 1213857
Other names: C. orbiculare MAFF 240422, Colletotrichum orbiculare 104-T, Colletotrichum orbiculare MAFF 240422
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