STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
swd1WD domain-containing protein. (472 aa)    
Predicted Functional Partners:
ash2
Ash2-trithorax family protein.
    
 0.999
SET1
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.997
sdc1
Set1 complex component sdc1.
    
 0.996
Wdr5
WD repeat-containing protein 5.
   
 0.996
Cob_v004274
Uncharacterized protein.
    
 0.973
hH3v
Histone H3-like centromeric protein hH3v.
    
 0.967
hh3
Histone H3.
    
 0.967
hh2a
Histone H2A; Belongs to the histone H2A family.
    
 0.962
Wdr82
WD repeat-containing protein 82.
   
 0.958
tup12
Transcriptional repressor tup12.
   
 0.956
Your Current Organism:
Colletotrichum orbiculare
NCBI taxonomy Id: 1213857
Other names: C. orbiculare MAFF 240422, Colletotrichum orbiculare 104-T, Colletotrichum orbiculare MAFF 240422
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