STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cob_01269Mitotic-spindle organizing protein 1. (75 aa)    
Predicted Functional Partners:
alp6-1
Spindle pole body component.
    
 0.997
TUBGCP5
Spindle pole body component.
    
 0.996
TUBGCP4
Spindle pole body component.
    
 0.989
alp6-0
Spindle pole body component.
    
 0.988
alp4
Spindle pole body component.
    
 0.987
tbg
Tubulin gamma chain; Belongs to the tubulin family.
   
 0.986
Cob_v005961
Putative methylcrotonoyl-CoA carboxylase beta chain.
   
 0.757
ask1
DASH complex subunit ASK1.
    
 0.639
Ezh1
Histone-lysine N-methyltransferase EZH1.
    
 0.608
ndk1
Nucleoside diphosphate kinase.
    
 0.601
Your Current Organism:
Colletotrichum orbiculare
NCBI taxonomy Id: 1213857
Other names: C. orbiculare MAFF 240422, Colletotrichum orbiculare 104-T, Colletotrichum orbiculare MAFF 240422
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.