Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDKA-1 | Cob_12646 | A0A484FCS5 | N4V6H9 | Cyclin-dependent kinase A-1. | Uncharacterized protein. | 0.794 |
CDKA-1 | Cob_v006629 | A0A484FCS5 | A0A484FS11 | Cyclin-dependent kinase A-1. | Uncharacterized protein. | 0.930 |
CDKA-1 | MED7 | A0A484FCS5 | N4UVA7 | Cyclin-dependent kinase A-1. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.966 |
CDKA-1 | RPL9B | A0A484FCS5 | N4V442 | Cyclin-dependent kinase A-1. | 60S ribosomal protein L9-B. | 0.938 |
CDKA-1 | SSN8 | A0A484FCS5 | N4UWJ7 | Cyclin-dependent kinase A-1. | RNA polymerase II holoenzyme cyclin-like subunit; Belongs to the cyclin family. | 0.975 |
CDKA-1 | med-6 | A0A484FCS5 | A0A484FLI0 | Cyclin-dependent kinase A-1. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.941 |
CDKA-1 | rgr1 | A0A484FCS5 | N4W1K5 | Cyclin-dependent kinase A-1. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.971 |
CDKA-1 | soh1 | A0A484FCS5 | A0A484FSR8 | Cyclin-dependent kinase A-1. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.956 |
CDKA-1 | srb4 | A0A484FCS5 | A0A484FAV1 | Cyclin-dependent kinase A-1. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.968 |
Cob_12646 | CDKA-1 | N4V6H9 | A0A484FCS5 | Uncharacterized protein. | Cyclin-dependent kinase A-1. | 0.794 |
Cob_12646 | Cob_v006629 | N4V6H9 | A0A484FS11 | Uncharacterized protein. | Uncharacterized protein. | 0.861 |
Cob_12646 | MED7 | N4V6H9 | N4UVA7 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. | 0.789 |
Cob_12646 | RPL9B | N4V6H9 | N4V442 | Uncharacterized protein. | 60S ribosomal protein L9-B. | 0.807 |
Cob_12646 | SSN3 | N4V6H9 | N4V495 | Uncharacterized protein. | Serine threonine-protein kinase ssn3. | 0.794 |
Cob_12646 | SSN8 | N4V6H9 | N4UWJ7 | Uncharacterized protein. | RNA polymerase II holoenzyme cyclin-like subunit; Belongs to the cyclin family. | 0.873 |
Cob_12646 | med-6 | N4V6H9 | A0A484FLI0 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.860 |
Cob_12646 | rgr1 | N4V6H9 | N4W1K5 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.865 |
Cob_12646 | soh1 | N4V6H9 | A0A484FSR8 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.851 |
Cob_12646 | srb4 | N4V6H9 | A0A484FAV1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.853 |
Cob_v006629 | CDKA-1 | A0A484FS11 | A0A484FCS5 | Uncharacterized protein. | Cyclin-dependent kinase A-1. | 0.930 |
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