STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGGC5_2059Eukaryotic translation initiation factor 5b. (866 aa)    
Predicted Functional Partners:
CGGC5_8403
40s ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.982
CGGC5_9188
60s ribosomal protein l2.
  
 0.971
CGGC5_4887
40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.968
CGGC5_2627
40s ribosomal protein s0.
  
 0.963
CGGC5_4586
60s ribosomal protein l5.
   
 
 0.962
CGGC5_10580
40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
   
 0.961
CGGC5_11006
Mitochondrial ribosomal protein; Belongs to the universal ribosomal protein uL11 family.
  
 0.961
CGGC5_9109
60s ribosomal protein l25.
   
 
 0.961
CGGC5_9533
60s ribosomal protein l17; Belongs to the universal ribosomal protein uL22 family.
  
 0.960
CGGC5_8181
40s ribosomal protein s5; Belongs to the universal ribosomal protein uS7 family.
   
 0.959
Your Current Organism:
Colletotrichum fructicola
NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5
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