STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGGC5_13572Uncharacterized protein. (159 aa)    
Predicted Functional Partners:
CGGC5_1090
Sphinganine hydroxylase; Belongs to the sterol desaturase family.
   
 0.834
CGGC5_13180
Gpi-anchor biosynthesis protein (Pig-f).
     
 0.788
CGGC5_5243
3-ketosphinganine reductase.
     
 0.788
CGGC5_2580
Sphingosine-1-phosphate phosphohydrolase.
   
 0.780
CGGC5_11233
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
    
 0.767
CGGC5_159
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
    
  0.734
CGGC5_8050
Hexosyltransferase.
     
 0.720
CGGC5_5272
Alkaline ceramidase family protein.
    
 0.697
CGGC5_2801
Alkaline phytoceramidase.
    
 0.697
CGGC5_7252
Glycerol-3-phosphate acyltransferase.
     
 0.692
Your Current Organism:
Colletotrichum fructicola
NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5
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