STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGGC5_816640S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (183 aa)    
Predicted Functional Partners:
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.997
CGGC5_10580
40s ribosomal protein s2; Belongs to the universal ribosomal protein uS5 family.
   
 0.997
CGGC5_8403
40s ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
   
 0.997
CGGC5_8162
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.997
CGGC5_5952
40s ribosomal protein s16; Belongs to the universal ribosomal protein uS9 family.
   
 0.997
CGGC5_13012
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.996
CGGC5_13059
40s ribosomal protein s20.
   
 0.996
CGGC5_12448
40s ribosomal protein s23; Belongs to the universal ribosomal protein uS12 family.
   
 0.996
CGGC5_9935
40s ribosomal protein s13; Belongs to the universal ribosomal protein uS15 family.
   
 0.996
CGGC5_9257
40s ribosomal protein s27.
   
 0.996
Your Current Organism:
Colletotrichum fructicola
NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.