STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGGC5_15176LysM domain-containing protein. (584 aa)    
Predicted Functional Partners:
CGGC5_3295
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.835
CGGC5_15029
Uncharacterized protein.
   
 0.787
CGGC5_3187
Cytochrome c oxidase subunit; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.747
CGGC5_814
Cytochrome c oxidase polypeptide vi.
   
 0.719
CGGC5_13874
Cytochrome c oxidase subunit v.
   
 0.681
CGGC5_13150
Uncharacterized protein.
   
 0.657
CGGC5_13151
Cytochrome c subunit vb.
   
 0.657
CGGC5_3000
Alpha-glucosyltransferase alg-10.
   
  0.648
CGGC5_13327
Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein.
   
  0.622
CGGC5_9895
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
  0.570
Your Current Organism:
Colletotrichum fructicola
NCBI taxonomy Id: 1213859
Other names: C. fructicola Nara gc5, Colletotrichum fructicola Nara gc5
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