STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN159_1497Beta-galactosidase. (1287 aa)    
Predicted Functional Partners:
BN159_2569
Secreted alpha-galactosidase.
 
 
 0.957
BN159_5961
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.938
mro
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.937
BN159_6443
Beta-galactosidase.
 
 
 0.932
lacZ1
Beta-galactosidase.
  
  
 
0.923
lacZ3
Beta-galactosidase.
  
  
 
0.922
BN159_2743
Beta-galactosidase.
 
 
 0.922
bgaB
Beta-galactosidase bgaB.
   
 0.911
BN159_4216
Aldose 1-epimerase.
  
 
 0.910
BN159_2868
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
  
 
  0.902
Your Current Organism:
Streptomyces davaonensis
NCBI taxonomy Id: 1214101
Other names: S. davaonensis JCM 4913, Streptomyces davaonensis 768, Streptomyces davaonensis JCM 4913, Streptomyces davawensis 768, Streptomyces davawensis JCM 4913
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.