STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMG28896.1COG4896 Uncharacterized protein conserved in bacteria. (77 aa)    
Predicted Functional Partners:
EMG28339.1
COG4897 Uncharacterized protein conserved in bacteria.
  
     0.737
EMG28551.1
Hypothetical protein.
  
     0.732
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
     0.723
EMG27609.1
Hypothetical protein.
  
     0.718
EMG26712.1
Hypothetical protein.
  
     0.709
EMG26876.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.703
ymcA
COG4550 Predicted membrane protein; Belongs to the UPF0342 family.
  
     0.703
EMG28160.1
COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); overlaps another CDS with the same product name.
  
     0.673
EMG28290.1
ATP synthase I.
  
     0.664
EMG28156.1
Lipoprotein.
  
     0.655
Your Current Organism:
Listeria fleischmannii
NCBI taxonomy Id: 1214117
Other names: L. fleischmannii subsp. fleischmannii LU2006-1, Listeria fleischmannii LU2006-1, Listeria fleischmannii subsp. fleischmannii DSM 24998, Listeria fleischmannii subsp. fleischmannii LU2006-1, Listeria sp. LU2006-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.