STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tagH_3Teichoic acids export protein ATP-binding subunit; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component. (318 aa)    
Predicted Functional Partners:
EMG28712.1
Teichoic acid transport system permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.992
EMG28893.1
Teichoic acid translocation permease TagG; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.969
EMG28519.1
Techoic acid ABC transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.969
EMG28520.1
Teichoic acid translocation permease TagG; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 0.969
EMG28885.1
Hypothetical protein; COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
 
 
 0.782
EMG28713.1
Hypothetical protein.
       0.752
tagF_3
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.647
tagF_2
COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
 
 
 0.604
EMG28717.1
COG0438 Glycosyltransferase.
  
   0.587
EMG28714.1
Hypothetical protein.
       0.554
Your Current Organism:
Listeria fleischmannii
NCBI taxonomy Id: 1214117
Other names: L. fleischmannii subsp. fleischmannii LU2006-1, Listeria fleischmannii LU2006-1, Listeria fleischmannii subsp. fleischmannii DSM 24998, Listeria fleischmannii subsp. fleischmannii LU2006-1, Listeria sp. LU2006-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.