STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMG28079.1COG1447 Phosphotransferase system cellobiose-specific component IIA. (109 aa)    
Predicted Functional Partners:
licB_5
Putative PTS system, beta-glucoside enzyme IIB component; COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.987
gmuC_4
Hypothetical protein; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.968
licB_4
COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.945
licB_6
COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.945
licB_2
COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.945
licB_3
Putative PTS system, IIB component; COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.945
licB_7
Putative PTS cellobiose-specific enzyme IIB; COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.945
licB_1
COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.945
EMG28878.1
PTS system, cellobiose-specific IIB component (cel A); COG1440 Phosphotransferase system cellobiose-specific component IIB.
 
 0.887
gmuC_6
PTS system beta-glucoside-specific, IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.883
Your Current Organism:
Listeria fleischmannii
NCBI taxonomy Id: 1214117
Other names: L. fleischmannii subsp. fleischmannii LU2006-1, Listeria fleischmannii LU2006-1, Listeria fleischmannii subsp. fleischmannii DSM 24998, Listeria fleischmannii subsp. fleischmannii LU2006-1, Listeria sp. LU2006-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.