Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APQ97_04135 | GCA_000440555_01276 | GCA_000440555_01275 | GCA_000440555_01276 | Unannotated protein. | Unannotated protein. | 0.776 |
APQ97_04135 | GCA_000440555_01277 | GCA_000440555_01275 | GCA_000440555_01277 | Unannotated protein. | Unannotated protein. | 0.678 |
APQ97_04135 | fic | GCA_000440555_01275 | GCA_000440555_01278 | Unannotated protein. | Unannotated protein. | 0.639 |
APQ97_04135 | parE | GCA_000440555_01275 | GCA_000440555_01279 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.642 |
APQ97_04135 | plsY | GCA_000440555_01275 | GCA_000440555_01280 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.414 |
GCA_000440555_01276 | APQ97_04135 | GCA_000440555_01276 | GCA_000440555_01275 | Unannotated protein. | Unannotated protein. | 0.776 |
GCA_000440555_01276 | GCA_000440555_01277 | GCA_000440555_01276 | GCA_000440555_01277 | Unannotated protein. | Unannotated protein. | 0.685 |
GCA_000440555_01276 | fic | GCA_000440555_01276 | GCA_000440555_01278 | Unannotated protein. | Unannotated protein. | 0.647 |
GCA_000440555_01276 | parE | GCA_000440555_01276 | GCA_000440555_01279 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.637 |
GCA_000440555_01276 | plsY | GCA_000440555_01276 | GCA_000440555_01280 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.483 |
GCA_000440555_01277 | APQ97_04135 | GCA_000440555_01277 | GCA_000440555_01275 | Unannotated protein. | Unannotated protein. | 0.678 |
GCA_000440555_01277 | GCA_000440555_01276 | GCA_000440555_01277 | GCA_000440555_01276 | Unannotated protein. | Unannotated protein. | 0.685 |
GCA_000440555_01277 | fic | GCA_000440555_01277 | GCA_000440555_01278 | Unannotated protein. | Unannotated protein. | 0.991 |
GCA_000440555_01277 | parE | GCA_000440555_01277 | GCA_000440555_01279 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.677 |
GCA_000440555_01277 | plsY | GCA_000440555_01277 | GCA_000440555_01280 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.472 |
fic | APQ97_04135 | GCA_000440555_01278 | GCA_000440555_01275 | Unannotated protein. | Unannotated protein. | 0.639 |
fic | GCA_000440555_01276 | GCA_000440555_01278 | GCA_000440555_01276 | Unannotated protein. | Unannotated protein. | 0.647 |
fic | GCA_000440555_01277 | GCA_000440555_01278 | GCA_000440555_01277 | Unannotated protein. | Unannotated protein. | 0.991 |
fic | parE | GCA_000440555_01278 | GCA_000440555_01279 | Unannotated protein. | Unannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. | 0.717 |
fic | plsY | GCA_000440555_01278 | GCA_000440555_01280 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.497 |
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