STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKM98149.1Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (80 aa)    
Predicted Functional Partners:
vapC-5
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
    0.952
vapC-3
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
    0.798
vapC-4
PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
   0.659
EKM98182.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
     0.581
vapC-6
PilT protein domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
   0.571
vapC-2
PilT protein domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
   0.570
vapC
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
 
   0.566
EKM99408.1
SpoVT/AbrB domain-containing protein; COG4456 Virulence-associated protein and related proteins.
  
     0.501
EKM98076.1
COG4453 Uncharacterized protein conserved in bacteria.
  
     0.499
EKM98148.1
Hypothetical protein.
       0.480
Your Current Organism:
Acidocella sp. MXAZ02
NCBI taxonomy Id: 1214225
Other names: A. sp. MX-AZ02, Acidocella sp. MX-AZ02
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.