STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGS69327.1COG1764 Predicted redox protein, regulator of disulfide bond formation. (141 aa)    
Predicted Functional Partners:
AGS69326.1
Oxidoreductase; COG2130 Putative NADP-dependent oxidoreductases.
  
    0.610
AGS69325.1
COG1846 Transcriptional regulators.
  
  
 0.476
AGS72193.1
Hypothetical protein; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
  
 0.472
AGS73011.1
COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
  
 0.472
AGS67586.1
CsbD family protein; COG3237 Uncharacterized protein conserved in bacteria; Belongs to the UPF0337 (CsbD) family.
  
  
 0.458
AGS69324.1
COG2981 Uncharacterized protein involved in cysteine biosynthesis.
       0.437
AGS69923.1
COG1846 Transcriptional regulators.
 
  
 0.432
AGS70094.1
COG1846 Transcriptional regulators.
 
  
 0.409
AGS68030.1
COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.405
Your Current Organism:
Streptomyces collinus
NCBI taxonomy Id: 1214242
Other names: S. collinus Tu 365, Streptomyces collinus Tu 365
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