STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2F7Z0Putative abc transporter. (2501 aa)    
Predicted Functional Partners:
A0A0G2IFY1
Putative udp-n-acetylglucosamine pyrophosphorylase.
    
  0.689
A0A0G2F761
Putative minor extracellular protease vpr; Belongs to the peptidase S8 family.
     
 0.608
A0A0G2H9F2
Putative minor extracellular protease vpr; Belongs to the peptidase S8 family.
     
 0.608
A0A0G2I8V5
Putative minor extracellular protease vpr; Belongs to the peptidase S8 family.
     
 0.608
A0A0G2HVX7
Putative anthranilate synthase multifunctional protein.
  
 
 0.594
A0A0G2F6C7
Uncharacterized protein.
    
  0.530
A0A0G2FFN6
Putative nucleoside-diphosphate-sugar epimerase.
    
  0.530
A0A0G2FSC6
Putative kelch repeat protein.
    
  0.530
A0A0G2H6N2
Putative telomeric repeat binding factor 1.
    
  0.530
A0A0G2HNT7
Putative kelch repeat protein.
    
  0.530
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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