STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2F911Putative cellobiose dehydrogenase. (578 aa)    
Predicted Functional Partners:
A0A0G2HTV5
ANK_REP_REGION domain-containing protein.
    
  0.588
A0A0G2IDY5
Putative anaphase-promoting complex subunit 10.
    
 0.454
A0A0G2FV94
Putative ankyrin repeat protein nuc-2.
    
 0.438
A0A0G2FHD8
Putative catabolite repression protein crec.
    
  0.435
A0A0G2FJ33
Putative taf5-like protein.
    
  0.435
A0A0G2FPD5
Putative wd repeat-containing protein slp1.
    
  0.435
A0A0G2FPI1
WD_REPEATS_REGION domain-containing protein.
    
  0.435
A0A0G2FR36
Putative wd repeat-containing protein.
    
  0.435
A0A0G2FR40
Putative wd repeat-containing protein.
    
  0.435
A0A0G2FVR4
ANK_REP_REGION domain-containing protein.
    
  0.435
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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